CLC Sequence Viewer 6.0.2 Description:

CLC Free Workbench creates a software environment enabling users to make basic bioinformatics analyses and smooth data management, combined with nice graphical viewing and output options. CLC Free Workbench is a tool that enables users to make basic bioinformatics analyses by creating a software environment.

CLC Sequence Viewer 6.0.2 Features:

· Bioinformatics features in Free Workbench
· Multiple alignment of DNA, RNA, and proteins: Two proprietary algorithms, ClustalW, Muscle, T-Coffee, MAFFT, Kalign
· Consensus sequence determination and management
· Conservation score along alignments
· Open reading frame determination
· Easy access to web-based protein and nucleotide search in GenBank, including download facilities and full graphical overview of sequence annotations of your choice
· Translation from DNA to proteins (all genetic translation tables)
· Reports with residue composition, molecular weight and iso electric point (for proteins)
· Neighbor-joining and UPGMA phylogenies
· Restriction site analysis and viewing
· Create reverse complement
· Shuffle sequence
· Option of viewing and graphical manipulation of bioinformatics analyses made in commercial workbenches from CLC bio
· Other features in Free workbench
· Full integration of data input, data management, calculations results, and data export. This eliminates time spent on manual data transfers between different programs and databases
· All types of files can be saved in local projects and launched from the program
· Detailed history log
· User-friendly graphical tools used in order to find and work with relevant regions of DNA, RNA and protein sequences
· Text-based sequence view
· Easy printing of reports and graphics
· Export of user-defined figures to various graphics file formats
· Import and export of data in a large number of file formats
· Option of working with different files and in different file projects at the same time
· Option of working in several active workspaces at a time, enabling simultaneous work on multiple projects

CLC Sequence Viewer 6.0.2 Requirements:

· 256 MB RAM required, 512 MB RAM recommended
· 1024 x 768 display recommended
· 3D viewing requires an OpenGL 3D graphics driver (included with almost all graphics cards)
· Java Runtime Environment version 1.4 or newer

Related searches:

dna

CLC Sequence Viewer security information

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