Jmol 11.7.40 Description:

Jmol is an applet and Java based application designed to display various 3D chemical information.

Jmol's features include reading a variety of file types and output from quantum chemistry programs, and animation of multi-frame files and computed normal modes from quantum programs

Jmol 11.7.40 Features:

· High-performance 3D rendering with no hardware requirements
File formats (see also file formats section within Jmol Wiki):
· CIF/mmCIF - Crystallographic Information File and Macromolecular Crystallographic Information File, the standards from the International Union of Crystallography
· CML - Chemical Markup Language
· CSF - Fujitsu CAChe chemical structure, now Fujitsu Sygress
· CTFile - Elsevier MDL chemical table
· GAMESS - General Atomic and Molecular Electronic Structure System output, Gordon Research Group, Iowa State University
· Gaussian 94/98/03 output - Gaussian, Inc.
· Ghemical
· HIN - HyperChem from Hypercube, Inc.
· Jaguar - Schrodinger, LLC
· MM1GP - Ghemical molecular mechanics
· MOL - Elsevier MDL structure
· MOLPRO - Molpro output
· MOPAC - MOPAC 93/97/2002 output (public domain)
· - MOPAC 2007 (v.7.101) graphf output (.mgf files) (public domain)
· NWCHEM - NWChem output, Pacific Northwest National Laboratory
· odydata - Odyssey data, WaveFunction, Inc.
· PDB - Protein Data Bank, Research Collaboratory for Structural Bioinformatics
· QOUT - Q-Chem, Inc.
· SDF - Elsevier MDL structure
· SHELX - Structural Chemistry Department, University of Göttingen (Germany)
· SMOL - Spartan data, Wavefunction, Inc.
· spinput - Spartan data, Wavefunction, Inc.
· xodydata - Odyssey XML data, WaveFunction, Inc.
· XYZ - Minnesota Supercomputer Institute XMol file
· XYZ+vib - XYZ format files with added vibrational vector information
· XYZ-FAH - Folding@home XYZ file
· * Files which are compressed with gzip will automatically be decompressed
· Animations
· Vibrations
· Basic support for unit cell and symmetry operations
· Schematic shapes for secondary structures in biomolecules
· Measurements
· distance
· angle
· torsion angle
· Support for RasMol/Chime scripting language
· JavaScript support library
· Exports to .jpg, .png, .ppm, .pdf, and PovRay

Jmol 11.7.40 Requirements:

· Java Runtime Environment

Related searches:

chemical

Jmol security information

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